rs29523803 SNP Detail

Summary

• ID
  rs29523803
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:9228328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGAGGAG GGTGAGGGAG
  GAGAGGAGAG GAGAGCAAGC AGGGGGAGGG AGAGGAGAGA TGATCAGGAA AGAACCGTAT
  GTGAGTGCTT GCTGGGTTTT CTCTTGCCTT CTGTTGGTTA TCCAGAAGAA TCCTATTAGA
  CTCAGCTGAG GGAGAGGCTG CTGCACGAAG TGTCCAGCCA ACTTGCTGAA ACTCCCTGTG
  W
  GTGGCTGATG GCAACCCTAC ATTCCGTTAC CACACCATGG CAGTTGTTAC TGTTATCCTC
  TGCACATCTG CATCCTTTAT ACAACCTAGA GTGGTCTGGG AAGAGTGGGC CTTGACTGGG
  AAAATGCCCC CATTAGATTG GCCTGTGGGC AAGCCTGTGA ACATTTTCTT GATTAATGAT
  TGATGTGGGA GGGCCCAGCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39578714	mCV22944484	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss145126172	ENSMUSSNP4205700	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29523803					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:9228328 () rs orientation: forward

Symbol	Name	Function Class
1700010I14Rik	RIKEN cDNA 1700010I14 gene	Intron
D17Mit225	DNA Segment, Chr 17, Massachusetts Institute of Technology 225	998 bp proximal
Rr521842	regulatory region 521842	369 bp proximal