rs29524135 SNP Detail

Summary

• ID
  rs29524135
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:52058568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG GGACACAGGA AGAGGTAACA
  Y
  ACTGCTTTAC CCGGGATGTG GGAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45327156	mCV23305700	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss146585081	ENSMUSSNP1002904	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss320302480	CHEV_2_52024076	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29524135					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:52058568 () rs orientation: forward

Symbol	Name	Function Class
Neb	nebulin	Intron
Rr556915	regulatory region 556915	677 bp proximal
Tssr24033	transcription start site region 24033	564 bp downstream
Tssr24034	transcription start site region 24034	1365 bp downstream
Tssr24035	transcription start site region 24035	1952 bp downstream