rs29525877 SNP Detail

Summary

• ID
  rs29525877
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97776804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TAGGGGCTGA GAGATGGCTC AAGGGTTAAG CACTCTTGCT GTTCCTGTAG AGGAGTTGGT
  CCCTTGGTAC CAGAAGTCTC ATGGTGGCTC AAAACCGTAC ATAACTCCTG TCTAGGGGGT
  CCACTCAGTG CCTTCTTCTG GCCTTCACAG GCTTCGCATA CCCATGTACT GCACTCGCAC
  ACATGCAGGC AAAACACTCA TACACATACA AATAAAAATA AATGATTTTA CAGAGAGAGG
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAAGGAAG
  R
  AAGGAAGGAA GGAAGAAAGA AAGAAATCTA AATTCACCTG CTCCCACAGA TCGAGCAGAG
  GGCAGGGATG GGTATACAGT ACCTAGTTTT CCACAGGAAG CAGAATGTGG AGGAGAGACA
  AGTGGGTGGA CAAGCTGGCC TTGAGGTAAG CAATAGACCT TCAGTAATTC ATAAGCTCGA
  GGTGCAGAAT ACTGCCTGAT AAGATACGGG GCTTGGACAC AATCACTGTT TATTGTGCAC
  AGGATCTTCC TCTTCTTTTT TGCAGAGAAA AATCTTACAC TGAATCCTGC CTTATCCATG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39081034	mCV24844461	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145038027	ENSMUSSNP3844271	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs29525877					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97776804 () rs orientation: forward

Symbol	Name	Function Class
D13Mit259	DNA segment, Chr 13, Massachusetts Institute of Technology 259	1184 bp proximal
Gm61494	predicted gene, 61494	within coordinates
Rr484414	regulatory region 484414	1282 bp distal