rs29530255 SNP Detail

Summary

• ID
  rs29530255
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46739023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATCTCCTG TCTCATTTTG
  AACACTACCA CTTGGGTCCC TACTGTTCCT TCCCAGGTTC ATCATCTTCA GTTTGTGTTT
  TGTTCTGTGA CCCATTTAGT TTAACCGGAG CCATCTGTGT GACCATTGGG TTGGAACTAT
  CCCTCACCTT CTGGGGTGAT CATTGGTGAC TCCACAACAT TTTACACTCT TTTTTTTTTT
  W
  AAAGATTTAT TTATTGTTAT ATGTAAGTAT ACTGTAGCTG TCTTCAGACA CACCATAAGA
  GGGCAACAGA TCTCATTACG GATGGTTGTG AGCCACCATG TGGTTGCTGG GATTTGAACT
  CAGGACCTTC AGAAGAGCAG TTGGTGCTCT TAACCACTGA GCCATCTCGC CAACCCCCCA
  TTTTACACTC TTAAACTAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39580954	mCV23183641	ABI	CRAMUS_MOUSE	f	SNP	A	T	T
ss145699428	ENSMUSSNP3197525	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29530255					SNP	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46739023 () rs orientation: forward

Symbol	Name	Function Class
Crip3	cysteine-rich protein 3	829 bp upstream
Rr527733	regulatory region 527733	617 bp proximal
Rr527734	regulatory region 527734	865 bp proximal
Tssr144853	transcription start site region 144853	820 bp upstream
Tssr144854	transcription start site region 144854	833 bp upstream