rs29534229 SNP Detail

Summary

• ID
  rs29534229
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24032284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATG TGGGATAAAC AATTTTAGGC
  K
  CCTCATCCAC CCAGACGCAG TAGTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39582825	mCV22837675	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss325327501	CHEV_17_23950277	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29534229					SNP	G	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24032284 () rs orientation: forward

Symbol	Name	Function Class
Gm49911	predicted gene, 49911	within coordinates
Srrm2	serine/arginine repetitive matrix 2	within coordinates
Tssr142962	transcription start site region 142962	932 bp downstream
Tssr142963	transcription start site region 142963	788 bp downstream
Tssr142964	transcription start site region 142964	109 bp upstream
Tssr142965	transcription start site region 142965	1806 bp upstream
Tssr142966	transcription start site region 142966	1886 bp upstream
Tssr142967	transcription start site region 142967	1962 bp upstream
Tssr142968	transcription start site region 142968	1977 bp upstream
Tssr146670	transcription start site region 146670	1931 bp downstream