rs29534821 SNP Detail

Summary

• ID
  rs29534821
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97776820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCTCAAGGGT TAAGCACTCT TGCTGTTCCT GTAGAGGAGT TGGTCCCTTG GTACCAGAAG
  TCTCATGGTG GCTCAAAACC GTACATAACT CCTGTCTAGG GGGTCCACTC AGTGCCTTCT
  TCTGGCCTTC ACAGGCTTCG CATACCCATG TACTGCACTC GCACACATGC AGGCAAAACA
  CTCATACACA TACAAATAAA AATAAATGAT TTTACAGAGA GAGGGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAAG GAAGGAAGGA AGGAAGGAAG
  R
  AAGAAAGAAA TCTAAATTCA CCTGCTCCCA CAGATCGAGC AGAGGGCAGG GATGGGTATA
  CAGTACCTAG TTTTCCACAG GAAGCAGAAT GTGGAGGAGA GACAAGTGGG TGGACAAGCT
  GGCCTTGAGG TAAGCAATAG ACCTTCAGTA ATTCATAAGC TCGAGGTGCA GAATACTGCC
  TGATAAGATA CGGGGCTTGG ACACAATCAC TGTTTATTGT GCACAGGATC TTCCTCTTCT
  TTTTTGCAGA GAAAAATCTT ACACTGAATC CTGCCTTATC CATGCAAGGA GATGGCAAAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39083509	mCV24844462	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs29534821					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97776820 () rs orientation: forward

Symbol	Name	Function Class
D13Mit259	DNA segment, Chr 13, Massachusetts Institute of Technology 259	1168 bp proximal
Gm61494	predicted gene, 61494	within coordinates
Rr484414	regulatory region 484414	1298 bp distal