rs29536104 SNP Detail

Summary

• ID
  rs29536104
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:181301161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGAGATGAA GGCAAGGGTG CAGAATATGT ATGCACTGAC
  TCACAGCTGG TCTCTACTAG CAGATCCAGC AGCCAAGGAA GCACGCGGTA CAGCTGCGCA
  R
  CAGTCGGAGG CGGCTCCTGC TACGTGCCCT ATACGCTGTC GCCACCTGCT GGGAAAAGCT
  CTTTGCACTA AGTGCCATGG CTACCGGCGA ATTCTAGCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J
ss45330885	mCV22775659	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J
rs29536104					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:181301161 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12934	CpG island 12934	within coordinates
Gm29797	predicted gene, 29797	Coding-NonSynonymous
Gm74533	predicted gene, 74533	within coordinates
Rr573063	regulatory region 573063	within coordinates
Rr573064	regulatory region 573064	36 bp proximal
Rr573065	regulatory region 573065	353 bp proximal