rs29537225 SNP Detail

Summary

• ID
  rs29537225
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:38304570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTAC AGTGTGTTGC CTACTGAGTC
  W
  AGATCTGGGA TAAGGCAGGT GCAGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss39085385	mCV23687362	ABI	CRAMUS_MOUSE	f	SNP	T	T	A
ss148895297	ENSMUSSNP3602591	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs29537225					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:38304570 () rs orientation: forward

Symbol	Name	Function Class
Rr271625	regulatory region 271625	1431 bp proximal
Rr275879	regulatory region 275879	570 bp distal
Rr279089	regulatory region 279089	744 bp proximal
Rr279090	regulatory region 279090	1134 bp proximal
Rr279091	regulatory region 279091	1813 bp proximal