rs29537297 SNP Detail

Summary

• ID
  rs29537297
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:84765106 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGGACAG CTCCTATAAC
  TAAGGTGCTT TGAACCCGTT TTAGTGGGGC AGCTAGTGGG TCTGTGGTCT CTCCCTCTGC
  AGTAAGTCAC TTGAATAGTC TTTTTTGATA CTTTGTTTGG GTGGTGATCG GGACCTCACT
  TCCTGGTGCT TGCCTTCCCA CCATCTCCCT GTAGAAAGAG GGCCGAGCCA GGAAGCTGGG
  M
  ATCTAATGCA AAAAGGCAGC TCTCTCTCCA AGGAGAACTG TGGTTCAGGC AAGGAAGACA
  TTGGCTCATT TGCTCTGGGC TGGAGAGCAG CACAGCTGGT TAGGCCAGCT ATTTCATGCT
  GATCACAAGC TCCGATGGGC AATTATAAAT GTCTTTGATT AATAAAAAAT GGGATGGTGA
  ATGAATAGTT AATCAATGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45332688	mCV23822632	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss146835514	ENSMUSSNP3203573	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29537297					SNP	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:84765106 () rs orientation: forward

Symbol	Name	Function Class
Rr560388	regulatory region 560388	1412 bp proximal
Slc43a3	solute carrier family 43, member 3	1837 bp upstream
Tssr18709	transcription start site region 18709	1821 bp upstream
Tssr18710	transcription start site region 18710	1849 bp upstream