rs29537717 SNP Detail

Summary

• ID
  rs29537717
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:65493642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCA GAAGTTTTAG CAAACTAGTG
  R
  TTCAGTTTGT CTTGCATTTT AAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45329540	mCV23763839	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss146714841	ENSMUSSNP2347628	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
ss320322020	CHEV_2_65501355	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs29537717					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:65493642 () rs orientation: forward

Symbol	Name	Function Class
Rr1450	regulatory region 1450	within coordinates
Rr558096	regulatory region 558096	1282 bp proximal
Rr558097	regulatory region 558097	1928 bp proximal
Scn2a	sodium channel, voltage-gated, type II, alpha	Intron