rs29538595 SNP Detail

Summary

• ID
  rs29538595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:33791653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA GAGAGAAATG AATGCAGCCA
  Y
  GCTCACTTGC CTGCTGTGCT CAGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45330815	mCV23584818	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss146409742	ENSMUSSNP6360827	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss320223704	CHEV_2_33757161	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29538595					SNP	T	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:33791653 () rs orientation: forward

Symbol	Name	Function Class
D2Mit203	DNA segment, Chr 2, Massachusetts Institute of Technology 203	1539 bp distal
Gm39792	predicted gene, 39792	within coordinates