rs29538922 SNP Detail

Summary

• ID
  rs29538922
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:21798073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCATCTCATC CCACCCATAC ATACATACAT ACTTCCCCCT
  TGCAGCCTTC CCACAACAGA GAAAAAAAAT GTCATCGTGG AAGTGTAGTA TGTACAGTGT
  R
  TCCCACAGTG TTCCTTTTGT CCACACTTCT TTCTTTACAA GTGTTCATTG CAATGACTCA
  CTGGTCTGGT ATGAGGCCTC TGGCTTCTGC TGCACTGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45331228	mCV25437353	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146353883	ENSMUSSNP1397386	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29538922					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:21798073 () rs orientation: forward

Symbol	Name	Function Class
Gm24886	predicted gene, 24886	1671 bp downstream
Gm39766	predicted gene, 39766	1839 bp downstream
Gpr158	G protein-coupled receptor 158	within coordinates
Rr41903	regulatory region 41903	1528 bp proximal
Rr372895	regulatory region 372895	within coordinates