rs29541275 SNP Detail

Summary

• ID
  rs29541275
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:20305058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATTA TGTGAACAAG CAAAAAGCAA
  Y
  ACCATGTTCA TGTATTAGAG ACTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss45331348	mCV23188133	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss146331194	ENSMUSSNP6784703	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320218532	CHEV_2_20221874	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs29541275					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:20305058 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl3	DNA segment, Chr 2, University College London 3	327 bp proximal
Etl4	enhancer trap locus 4	within coordinates
Gm17171	predicted gene 17171	570 bp downstream