rs29544426 SNP Detail

Summary

• ID
  rs29544426
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:144177851 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCTTCCT TCCTTCCTTC
  CTTCCTTCCT TCCTTCCTTC CTTTTCTTTT TCTTTAAGAT TTCTTTATGT GAGCACACTG
  TTGCTCTCTT CAGACACACC AGGAGAGGTC ACCAGATCCC ATTACAGATG GTTGTGAGCC
  ACCATGTGGT TACTGGGAAT TGAACTCAGG ACCTCTGGAG GAGCAGTCAG TTCTCTTAAC
  Y
  ACTGAGCCAT CTCTCCAGCC CTCAGCCTGC TTTCTTACAC AACCCAGGAC CACCTGTCCA
  GGAATGACAC TGCCCACAGG GGCCCTTCCC CGGCAAAAAT TAACCAAGAC ATGTACCCTA
  CAGATCTGCC TACTGGCCAA TCATATGAAA ACTTTTTTTG AGACAGGATT TCTCTTTGTA
  GCCTTGGCTA TCCTGGTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45830528	mCV24556764	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss144609020	ENSMUSSNP7094522	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29544426					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144177851 () rs orientation: forward

Symbol	Name	Function Class
2900089D17Rik	RIKEN cDNA 2900089D17 gene	740 bp downstream