rs29545426 SNP Detail

Summary

• ID
  rs29545426
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147784554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCGCTCTGA GCTGTGTTAA AAGTGGATGG GAAAGTCAGG
  GAGGGCACAA GCAGACAGAC CAGGTTCTGA GGGGAAAAGG AAGGGATGTG AGGAGTCCCT
  W
  TGTCAGGGAG AGGACAGGGA AGAGTGACAA GCCACTGGGC CTCACTCCAC CCCTGCCAGC
  TGTCTTCCTG TGTTCTCTGA TCACAGCTTC AGTAGCCTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45333183	mCV24540198	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T
ss147906918	ENSMUSSNP923425	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29545426					SNP	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147784554 () rs orientation: forward

Symbol	Name	Function Class
9030622O22Rik	RIKEN cDNA 9030622O22 gene	1829 bp downstream
Rr566828	regulatory region 566828	within coordinates
Rr566829	regulatory region 566829	1660 bp proximal