rs29545864 SNP Detail

Summary

• ID
  rs29545864
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:83478000 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAT AGCCAACAAA ATATATTAGG
  Y
  TGTGTCTTCA GAGACAGGAC TACTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45333926	mCV23818117	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T	C
ss146812178	ENSMUSSNP2126137	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss320367678	CHEV_2_83487813	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29545864					SNP	T	T	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:83478000 () rs orientation: forward

Symbol	Name	Function Class
Rr57102	regulatory region 57102	1599 bp distal
Rr397084	regulatory region 397084	1158 bp upstream
Zc3h15	zinc finger CCCH-type containing 15	within coordinates