rs29546147 SNP Detail

Summary

• ID
  rs29546147
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:122835849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAG TACTGTATTT AAAGGCATGT
  R
  TCACCATACT GGGCTTCCAT GGTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45830550	mCV22632328	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss149189834	ENSMUSSNP3835605	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321669490	CHEV_5_123147795	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29546147					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:122835849 () rs orientation: forward

Symbol	Name	Function Class
Gm10064	predicted gene 10064	186 bp upstream
Gm71244	predicted gene, 71244	within coordinates
Rr378567	regulatory region 378567	347 bp upstream
Rr619947	regulatory region 619947	1935 bp distal
Rr619948	regulatory region 619948	316 bp proximal