rs29546612 SNP Detail

Summary

• ID
  rs29546612
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:112499944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCG TGGTTCCTCT CTGTCATCCC
  K
  CCAGGACACC CCTGCACTGG GCTGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39086938	mCV23355084	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	T
ss145237604	ENSMUSSNP4251375	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
ss324529317	CHEV_13_113153618	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29546612					SNP	T	G	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:112499944 () rs orientation: forward

Symbol	Name	Function Class
Ankrd55	ankyrin repeat domain 55	within coordinates
Gm48837	predicted gene, 48837	within coordinates
Rr278286	regulatory region 278286	1448 bp distal
Rr282338	regulatory region 282338	within coordinates
Tssr121108	transcription start site region 121108	7 bp upstream
Tssr121109	transcription start site region 121109	36 bp upstream