rs29547692 SNP Detail

Summary

• ID
  rs29547692
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:67054425 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        AGACT GATGCCAGAT TCACTATGTA
  R
  ACAACTGTAG TCTTGAACTT GCAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
ss39086269	mCV23328759	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss149258983	ENSMUSSNP665908	ENSEMBL	ENSEMBL_Sanger	r	SNP	T	C			C
ss324388721	CHEV_13_67007297	CHEVERUD	SCREENING_POP	r	SNP				T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	MSM/Ms	SM/J
rs29547692					SNP	A	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:67054425 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi5796	CpG island 5796	988 bp distal
Mterf3	mitochondrial transcription termination factor 3	607 bp downstream
Ramacl	RNA guanine-7 methyltransferase activating subunit like	within coordinates
Rr273407	regulatory region 273407	1176 bp proximal
Rr281575	regulatory region 281575	224 bp distal
Rr369737	regulatory region 369737	929 bp downstream
Tssr123084	transcription start site region 123084	991 bp upstream
Uqcrb	ubiquinol-cytochrome c reductase binding protein	983 bp upstream