rs29550863 SNP Detail

Summary

• ID
  rs29550863
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:20646576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTGAAACAG TATTGGAAGT GCGTGGCAGG TGAATATTAC GACACTGAGA CAATTCTCTT
  AGCCTGTCCA TGAGAACAGT GGTCATGTAT ATGTGTAGTG GGCATCATGA AAACTAGTTT
  ACCATTAGCT TATGTTCTGT ATATTTACTT TACAGTGTAA TCTTTTTCCC TCTCCAAGGT
  ATAGCAAAGT TATAGAAATC ATTGTATTAC CCTTCAAACA CACTGCTTTG GAAGCCAGCA
  TTTAGGACAG ATTTTTTTTT CCCTAGGGCA ATGAAATGCA GGCTGTGCGT GCGCGCGCGC
  R
  CACACACACA CACACACACA CACACACACA CAACAAATAC ACAACACACA CACACACCCC
  TATATCTCCT CACCTCACAA AGGAAAGCCA TGACAAACCA AAGTATCAGC GAGTTTTTAT
  TGGGATTACT AAAGGGACTA GGGTGAGGGG TTGCTTACAA GAGCAGGGAT GACTCAAAAG
  CAGCTGCATC CCGGAAAGCC GTCCCTGGCA CTGGGGAGGA CTCAGGCAAG ATGCAGCCCT
  GGGGTTCTCA GCACAGCTTG CAGGCAAGAG ATTGTTGTCC AAGAGATCAC CTACGCCTAT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45334403	mCV25435209	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29550863					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:20646576 () rs orientation: forward

Symbol	Name	Function Class
Etl4	enhancer trap locus 4	within coordinates
Rr366849	regulatory region 366849	within coordinates