rs29553231 SNP Detail

Summary

• ID
  rs29553231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59788713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCAGGATA CCTGGGATCT CAAGATTTAG GGGATGAAGG
  CAGCAAAGTC AATTCAAGGC CTTAGCTGCA CAGTGAGTTC CGAGGTCAAC CAGGCTACAC
  R
  AGAGCTTATC TCAAAAAGCA AAACAAAAAA GTGTCAGCCC TGGATTCCTG ACATCGCCAG
  AAAGAGTGGC TTCAGAACAG CTTGGAACTT GTGTTTTGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39088811	mCV23287416	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss149079715	ENSMUSSNP3434955	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29553231					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59788713 () rs orientation: forward

Symbol	Name	Function Class
Golm1	golgi membrane protein 1	within coordinates
Tssr4093	transcription start site region 4093	662 bp upstream
Tssr122874	transcription start site region 122874	727 bp upstream
Tssr122875	transcription start site region 122875	710 bp upstream