rs29554234 SNP Detail

Summary

• ID
  rs29554234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125574428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAC CCTCGTTGGG AAGTGGCGGA
  R
  ATCCGGAGAT GGGCTCGGTT ATCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45336085	mCV22614057	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147486243	ENSMUSSNP4270267	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320497854	CHEV_2_125558244	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29554234					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125574428 () rs orientation: forward

Symbol	Name	Function Class
BC026863	cDNA sequence BC026863	within coordinates
Cpgi12201	CpG island 12201	374 bp distal
Rr397270	regulatory region 397270	461 bp downstream
Rr564273	regulatory region 564273	within coordinates