rs29556222 SNP Detail

Summary

• ID
  rs29556222
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131406045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCAGCAAT TCTTACTGTA GGGTCTTCAG CAACTCTCTG
  GGACCATTGC CTTCTTTACA GCTGAGGGCA AATGGAATTG GAATAGAACA GAATAAAGCA
  R
  TGGGATTCTG GCTTCAAAGC AAGACTTCAA ACCAGCATCT TAGAGAAGTG TTGGCTGGAT
  TGGGGCAATC TAAGTCTGAC CCTCTGGGCC CTCCTTGCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45335627	mCV22780670	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29556222					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131406045 () rs orientation: forward

Symbol	Name	Function Class
Adra1d	adrenergic receptor, alpha 1d	1842 bp upstream
Cpgi12295	CpG island 12295	984 bp distal
Gm14285	predicted gene 14285	within coordinates
Rr55657	regulatory region 55657	645 bp distal
Tssr26401	transcription start site region 26401	1623 bp upstream
Tssr26402	transcription start site region 26402	1590 bp upstream
Tssr26403	transcription start site region 26403	1352 bp upstream