rs29558283 SNP Detail

Summary

• ID
  rs29558283
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:66381960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAA GTTATATTAA TGGGGTTTTT
  W
  AAAAATGAGT ATATATAATA TCAAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45834494	mCV22883490	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss148587134	ENSMUSSNP3910719	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss321563152	CHEV_5_66615856	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29558283					SNP	T	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:66381960 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15907	CpG island 15907	1200 bp distal