rs29558515 SNP Detail

Summary

• ID
  rs29558515
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:14440989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGCCTCAC CTGTGTAAGA
  CAGGACCACA GTCAGCCTGC AGGGCCTGAC CTGTGCCTTC CATTTGATGG ATTGCTGTAG
  AACCCAACAA AAGTCGCTGA GTTAGGCTAA GTCCAGTGTC TGTAAAAGCC ACTGGGGCAG
  CTGGACATGG AGCTGAGTAG GTGCTTAACA GAGAAGAGCA TGAAAGCTAA GGTCCTCTCC
  R
  CCTCATCTTG AATTTTCCTC GTTAGTTTCA GAGTTAACAT TGACTATAGA AGTTCATCAA
  TATCCTCGAT GTGTTCAAGG CTGAGTCATA TTCTCAATCC TATTTCATGC ATTGTGTTAT
  TTAACTGACT ATAATATGCT CCAAACTCTA CTGATCCAGA AGACAGTCTG CTTTTGACGA
  CTACTAGATG CCAGTATCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39589364	mCV25335619	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146647382	ENSMUSSNP6730342	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29558515					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:14440989 () rs orientation: forward

Symbol	Name	Function Class
Gm29992	predicted gene, 29992	1090 bp downstream
Gm50095	predicted gene, 50095	455 bp upstream
Rr534283	regulatory region 534283	1674 bp distal