rs29560070 SNP Detail

Summary

• ID
  rs29560070
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180434612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTA TCTACTGACA GCTTTGCACT
  M
  GGACTGAGAC CCAGGGCTGT GGGCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45337845	mCV23365405	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss320632366	CHEV_2_180527524	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29560070					SNP	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180434612 () rs orientation: forward

Symbol	Name	Function Class
D2Mit463	DNA Segment, Chr 2, Massachusetts Institute of Technology-463	1635 bp proximal
Gm75401	predicted gene, 75401	within coordinates
Rr572849	regulatory region 572849	810 bp distal
Rr572850	regulatory region 572850	906 bp distal