rs29560553 SNP Detail

Summary

• ID
  rs29560553
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:21088528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAA TGTAGGAAAA GTCTGTCTAT
  R
  TAATTAAAAT TGTGTTTTGG GATGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss39588312	mCV23266741	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss146826258	ENSMUSSNP257382	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs29560553					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:21088528 () rs orientation: forward

Symbol	Name	Function Class
Rnf125	ring finger protein 125	within coordinates
Rr370347	regulatory region 370347	1683 bp upstream