rs29562252 SNP Detail

Summary

• ID
  rs29562252
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163630432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATGCCCTT TGCTGGACAG
  TGAAGGGGCC ATTCCACAGA ATAGGAAACT GGGGTCTAAA CACTTGGTGG ATAACTGTGG
  GGTCATGGAA GTACAGCCAT CCATCTGTCT CCTTTCCCAT CTTTGGACTC TTGCCTTCAG
  AATGCCAGCA ACCCCAGGCA TCCTGTGGCT TGCCCTGGCT ATCCATCACA TCCTCTAAAT
  R
  TGCCACCGCC TAAACACTCA CCCCACAAGC CTGTGAGTGG CAAGAAAGGT CATTTCCATT
  TGACAAACAG TTGATGCTGC TTACCTGGAC TCTAGAGACC CTCTACTGGG ATCCCAGCTG
  CCCCAGGCTC CCTGCTATCC AGGTCAGTAT TGTGAAACTC ACTTTGACCA GCAGGGGGTG
  GCATGTACTC AGAGATAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45337980	mCV23179137	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss148212653	ENSMUSSNP4828799	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs29562252					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163630432 () rs orientation: forward

Symbol	Name	Function Class
Gm75515	predicted gene, 75515	1278 bp downstream
Rr569489	regulatory region 569489	334 bp distal
Rr569490	regulatory region 569490	58 bp proximal
Rr569491	regulatory region 569491	164 bp proximal