rs29567482 SNP Detail

Summary

• ID
  rs29567482
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127741140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACACTTGAC CTTGACATGA
  AAGCTGACAT TTCTTGATCA GAGATGGGGA AGAGGAAAAG CAGTCTGGAA AGAGGAGGAA
  CGATAGAGGA ACTTTCAAGG TTGGGCAAGA AAGTTGAAGA TGGGTCATAT GTTGACTTCT
  CTCCTCCAGG TCTAAGGTGA AGAAGTTGGG GTGGTGTGAA GCTTGGGGAA AAGATTGTGT
  Y
  GGTCAGATCT CTGTTGCTGA AAACAAAGGA CCCAATAAAA CCAACTTAAA AGGAAAGTCA
  GTGTGTTTCA TCATTTTGAA GGGTTCAGCA CATGGTTGGC TTTGTTGCGT GGGCCCTATG
  GAAGGCAGTA CATTATGGTG AGGAGTGTTC ATGGAGCCAA GCTGCTCACA TCATGGTGAC
  AGGGAACTGA GGCAGGTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45338753	mCV23903747	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss147544610	ENSMUSSNP2244211	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
ss320501027	CHEV_2_127724956	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29567482					SNP	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127741140 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	Intron
Rr564612	regulatory region 564612	1186 bp distal