rs29568279 SNP Detail

Summary

• ID
  rs29568279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:75140029 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCT CTCAACCTCC CTAATGCTGT
  R
  CCCTTTGACA CAGATCCTCA TGTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45837565	mCV23006428	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss148683110	ENSMUSSNP1680636	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29568279					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:75140029 () rs orientation: forward

Symbol	Name	Function Class
Gm52777	predicted gene, 52777	839 bp downstream
Rr613376	regulatory region 613376	302 bp proximal
Tssr46681	transcription start site region 46681	510 bp upstream