rs29568710 SNP Detail

Summary

• ID
  rs29568710
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:100911202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTATAGC CTGCCAGTGT
  TTGCCTTTCC TTTTGTTTCG TTTCGTTTTG TTTTGTTTTT TTGAGGCAGG GTTTCTCTGT
  GTTGACCTGG TTGTCCTGGA ACTCACTCTG TAGACCAGGC TGGCCTCGAA CTCAGAAATC
  CGAGCCTCTG CCTCCCAAAT GCTGGGATTA AAGGCGTGCG CCACCGCCAC CCAGCTATAG
  K
  CTGCCAGTGT TTCACAGCAA GACCCTGTCT CAAAAATTCA AAACAAGTCT GTTATGAGTT
  TTAAAAAAAT TTTTAGATGT ATTTATTTTA TGTATATGAG TACACCATTG CTTTCTTCAG
  ACACACCAGA AGAGGGTATC AGACCCCACT GCAGATGGTT GTGAGCCACC ATGTGACCTC
  TGGAAGAGCA GTCCAAGTTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39094068	mCV23726400	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	G
ss145091306	ENSMUSSNP3721803	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29568710					SNP	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:100911202 () rs orientation: forward

Symbol	Name	Function Class
Cenph	centromere protein H	within coordinates
Cpgi6041	CpG island 6041	611 bp proximal
Rr280869	regulatory region 280869	within coordinates
Tssr123809	transcription start site region 123809	1109 bp downstream
Tssr123810	transcription start site region 123810	1150 bp downstream