rs29571343 SNP Detail

Summary

• ID
  rs29571343
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:75987409 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTA AGGCTTTTGG AGTAAGAGAG
  R
  CCTATTAAAA AGCTTAGCTT CACAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39094871	mCV22680306	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss144639078	ENSMUSSNP454585	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss324437225	CHEV_13_75976738	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29571343					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:75987409 () rs orientation: forward

Symbol	Name	Function Class
Glrx	glutaredoxin	595 bp upstream
Rr482792	regulatory region 482792	1430 bp distal
Rr482793	regulatory region 482793	88 bp proximal
Tssr120401	transcription start site region 120401	584 bp upstream
Tssr120402	transcription start site region 120402	607 bp upstream
Tssr120403	transcription start site region 120403	712 bp upstream
Tssr120404	transcription start site region 120404	781 bp upstream