rs29571673 SNP Detail

Summary

• ID
  rs29571673
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:35124401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGATGTGTA GGGTTTGCCA TTGTCAGCAT TTCAAGAACA
  ATCACATAGT ATTAGGCAGT TGCCAGCTGT TGGACTGCTG AGAAAGCAGG TCCTGGAAGA
  R
  CATTGCTTGT CTGCTCTCAA AGTCTCTGAT GATAGTAAAA GGATCCTGCA AGAGGGAAAA
  ATAATCCAGG AAAGAAACTT AGACATGGAG CTCCGACCC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39093413	mCV24488238	ABI	CRAMUS_MOUSE	f	SNP	G	A					A
ss51085191	NES14364933	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	A	A	G	A		A	A	A		A
ss148860471	ENSMUSSNP5833548	ENSEMBL	ENSEMBL_Sanger	f	SNP		A					A
ss324313970	CHEV_13_35032287	CHEVERUD	SCREENING_POP	f	SNP										A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29571673					SNP	G	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51085191	NES14364933	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:35124401 () rs orientation: forward

Symbol	Name	Function Class
Gm8245	predicted gene 8245	225 bp upstream
Tex56	testis expressed 56	within coordinates