rs29573199 SNP Detail

Summary

• ID
  rs29573199
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126919539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTAGACAG ATGTGCGGTA
  CTGAGCCTTT CGTGTGATAC CTAGACAGAT GTGTGGTACT GAGCCTTTCG TGTGATGTCT
  AGACAGATGT GCGGTACTGA GCCTTTCGTG TGATACCTAG ACAGATGTGT GGTACTGAGC
  CTTTCGTGTG ATGCCTAGGT ACTGAGCACT TGCTGAGCAC TCACAGGGAT CATTCTCAGC
  R
  TTATTATTTT TTTATGCATT ACTTTATCCT TCCCCTCTGT GCTTTATGTT TTGCTATTGC
  AACCTCCCAG TGCTTCACGA GCCCTCTCCT ATGCTCCCTC TCACATCCCC GTCTTTTAAG
  ACTTTGCTTT GCCATCCCCT TTCCACCATG TTAGTGTGAT TCTGTGTTTC ACCTTGCCGC
  CGCCGGGGAC CTGAATGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
ss45341791	mCV23164685	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147518842	ENSMUSSNP2035693	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss320499203	CHEV_2_126903355	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	LG/J	SM/J
rs29573199					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126919539 () rs orientation: forward

Symbol	Name	Function Class
Blvra	biliverdin reductase A	within coordinates
Rr38145	regulatory region 38145	62 bp proximal
Tssr19977	transcription start site region 19977	1301 bp upstream