rs29573300 SNP Detail

Summary

• ID
  rs29573300
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32127350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTTTACCTC TCTTGACCAG GTTAAACCCC TCAGCATGCC
  AAGGCACAGA CATGTATGCA TATAAATGTG AGCACACACA CAGACTCATA AAAAGACAGA
  Y
  ACACACACAC AGACACATAA AAAGACAGAT AGAAACACAC ACTAAAAACA AAATTTCTTG
  ATAGACATTT CAGGACCACT CAGTTGATTT TTTTTTTCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39095678	mCV23989459	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148842920	ENSMUSSNP3355142	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
ss324310995	CHEV_13_32035236	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29573300					SNP	C	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32127350 () rs orientation: forward

Symbol	Name	Function Class
Gmds	GDP-mannose 4, 6-dehydratase	within coordinates
Rr275635	regulatory region 275635	within coordinates