rs29574147 SNP Detail

Summary

• ID
  rs29574147
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:39254483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTTCTCA TAGTCAACAA
  TGCCAGCAAA CTGTAGACTC AAGGCATCAG ATAGCAACTT CTGGCTGTCT TATCACAATA
  GACCACTGGG TCCCAATTCC CTTCCCAAAT CACTATTATT CAACCCAACA CAGCAGGGCT
  GAGGGTTCCA AGAGGTCCTA ATCATAGGGA CAAAAGCAAG CCTTATCTTT TATGATTATA
  R
  TTTTAGTTTT TAAAGTCTCA TTCCCACTCC AAAGCTTCCA TTACATTAGT CAGTTTTGTA
  GTCTTTGCAT GGGTCTCCTC TAGTTCTCCT ATGGCTTCTT AGACAGGACT TAACAAAAAC
  ATCTTGTTGT ACCCCAGTCC TGGAGTCTCT AAAATGATTG GTTCATGTTT TGAAATTAAT
  TAAAATAACA CACTATCATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39095685	mCV24499050	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148902949	ENSMUSSNP4619469	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29574147					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:39254483 () rs orientation: forward

Symbol	Name	Function Class
Gm60523	predicted gene, 60523	within coordinates
Rr388296	regulatory region 388296	within coordinates