rs29575117 SNP Detail

Summary

• ID
  rs29575117
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:70372683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCCCTCCCC CTCCCCTAGC ACTAGAATGG CACTCAACAC TCCTGCTGAT AAACAGCAAA
  ACTCCAGGTG CCTGTCCTTG AGACCTTAGA GAAATAAGCT CAAGGGAGAT CATGAGAAAA
  AAAGGTAAAC AGAGGTCAGG TCACAGACAG TTATGACTGG CCATAAAATT AGTCCTTGAG
  CAGACACCCA TTAACCACTG GTCCTGCTTC AGCACAATTC CACCCTCTAC TCCCCTTTTC
  TGTGAATATT CACCCTATTC CTCTTAACTA TACTGTACAT AAACCCAATG TTTTCATGAT
  Y
  GATTGCCAGG TGCGAGGTGG GTGAACCGAG TTCTAACTTG AAAATAAACT CTTTTGCGAG
  TTGCAGCAGA CTTTGCAATT CTTGGGCTCA TCTGAGTTTC CCGTGAACTC AGAGCACAAC
  AAGAGCATTC ATGTAGGTAA GACCTACAGA AACTCTAGCC AGACCAAAAA ATAAAAATAA
  AAATTCCAGC ATAAAGGGAA GAACCTGACT AGGAAATGCC ATCATGAAAT GTGGAGTTAT
  TGGCAGTTGA TAGTTTCTGG GACATGGAGA GTCAACTTTC CTTAATGATG TGACTCTCAT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39593644	mCV23987640	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss147396180	ENSMUSSNP6479414	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs29575117					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:70372683 () rs orientation: forward

Symbol	Name	Function Class
Dynap	dynactin associated protein	817 bp downstream