rs29577465 SNP Detail

Summary

• ID
  rs29577465
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:128845984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAGCTTG AAGCTGAACA
  AATAAAGAGT AACTGTTTCT ATCACTGTGA TGAGCAAAAA GTAATTTTTT TCCATCACTG
  GGACGAGTCT TGTAGTCACT GTCCAAAGAC AATGAACTGT GACCTCATAC AAACTCATAG
  ACCAAAATGG TTCTCAAAAC GCAAAGCTAA AGAGTAGACT GTGAGCTGGG CAGTGGTGGC
  R
  CATGCCTTTA ATCCCAGCAC TTGGGAGGCA GAGGCAAGTG GATTTCTGAG TTCAAGGCCA
  GCCTGGTCTA CAGGGTGAGT TCCAGGACAG GACAGCCATA TCTACACAGA GAAACCCCAT
  CTCAAAACAA AACAAAACAA AAAAACAAAA AACAAAAAAA GAAAGAGAGA GAGAGAGAGA
  GAAGCAAAGC AAAGCAAAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45839147	mCV23139694	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss321688098	CHEV_5_129274795	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29577465					SNP	G	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:128845984 () rs orientation: forward

Symbol	Name	Function Class
Gm42875	predicted gene 42875	1113 bp upstream
Rimbp2	RIMS binding protein 2	within coordinates