rs29577665 SNP Detail

Summary

• ID
  rs29577665
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:33572698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCC CTCAGAACCC AGCAGCAAGA
  R
  GGCAGGCAGG TCAGTGGGGC CCTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss39594362	mCV24523891	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss325579766	CHEV_18_33599299	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs29577665					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:33572698 () rs orientation: forward

Symbol	Name	Function Class
Nrep	neuronal regeneration related protein	within coordinates
Tssr152756	transcription start site region 152756	1326 bp upstream
Tssr152757	transcription start site region 152757	1297 bp upstream
Tssr152758	transcription start site region 152758	1009 bp upstream
Tssr152759	transcription start site region 152759	885 bp upstream