rs29577902 SNP Detail

Summary

• ID
  rs29577902
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103132292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGA AAGTAGCGCC CAGCCATTCC
  K
  GATCCCTAAC TTCTCCTTAT CCATT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45343044	mCV22830090	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	T
ss147131905	ENSMUSSNP5002606	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29577902					SNP	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103132292 () rs orientation: forward

Symbol	Name	Function Class
Ehf	ets homologous factor	within coordinates
Gm74896	predicted gene, 74896	1483 bp upstream
Rr55313	regulatory region 55313	within coordinates
Tssr25460	transcription start site region 25460	1211 bp downstream
Tssr25461	transcription start site region 25461	1232 bp downstream