rs29579246 SNP Detail

Summary

• ID
  rs29579246
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:33578141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CAGTAAAGAA GAATGGGAAA TGCTCAGTTA CTGAGACCCA TATCCCACAC TCCGCTGTCT
  TAATTTGATG CTTCTAAATC TCAAGTGAGG CTCCTTAACT TTATTTTCAG GGTAGATGAA
  CTGAAGCAAT GATCCTTTCA ATTCCTAGGC TAACCACAAT CAGATCATAG AGTCCCCAGT
  AAGTCATTTC TGAGCCTCAG TTTCTTTATC TGTAAGGTGG GGGTAGCAAC AGTTCCAACC
  AGGGACACTG TGGAGCACAC AGGTTCCAAG ATGGGCTACC ACCTGAGCCC TCTTGGTGGT
  K
  TCTTTTTTTT TTTTTTTTCG AGACAGGGTT TCTCTGTGTA GCCATGGCTG TTCTGGAACT
  CACTTTGTAG ACCAGGCTGG CCTCGAACTC AGAAATCCGC CTGCCTCTGC CTCCCAAGTG
  CTGGGATTAA AGGCGTGCTC CACCACACAA GGGGATGGTC TTTACCTTGC ATAGATTGCT
  TCTGGTTTCT GGGGTAGGAT GGGGCTCCTG ATTCACTCAC ATTCTGAGTG GCAGAAGCTT
  GCCACACAGT GGGGCTAGGC TGCCTTGCTT GGCATGGTGA CTTTGTGAGA AGTAAGGCCA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45342848	mCV23079081	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29579246					SNP	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:33578141 () rs orientation: forward

Symbol	Name	Function Class
Rr367177	regulatory region 367177	704 bp upstream