rs29581576 SNP Detail

Summary

• ID
  rs29581576
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134679698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTAAATGAAA TGAACAATTC ACAAATGTAT TTCTTAGCTG TTAAGTACAA TTTTGGTTAA
  TGTCAAACCT TCCACCTTTC AATAAAACTC TATGTGTAAG TTTTTTTTAA TTCACTTAAT
  CTTTCTGTTA ATAGCAAGTA CAGCGAATAC CTGGAGCATT TTAATGTTCC ACTATTCAGG
  GTGTTAAACT AATTGAAGCA TGGTTTGGAA CTCCTGGCAG GTTTATAGAA AATTAAAATT
  AACTAGCTTT TTTGGCTATA TATATATATA TATATATATA TATATATGTG TGTGTATTAT
  R
  TATATATATA TATATATATA CATATACATG TGAACAGGTT TTAAATGGAG TTATGTAATG
  GGAGTGGAGA GCAATGACTC ACCTAGATTC CAACATTCTC AAATACAGAG CCTAGTGACA
  GCCATGGGTT ATTTTTCTTG GAACAGGAAC TGGGTGGCAC AGGATGACTT GTGTTACTCT
  GTATGGTCTA CCCTCTTCTA CTTGGCAAGC CTGAGTTTGT TCTCTAGAAA GAAATAGGTC
  TCTATGGAAT TAAACAGCAC ATAGAAGAGT GCATGAAGTC TCAGTTTGGA TATGATACCT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J
ss45343987	mCV27542886	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J
rs29581576					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134679698 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565690	regulatory region 565690	1543 bp distal
Rr565691	regulatory region 565691	1378 bp distal
Rr565692	regulatory region 565692	486 bp proximal