rs29582633 SNP Detail

Summary

• ID
  rs29582633
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:4296804 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTG TTTCTAATTT TTCAATAGGT
  R
  TTTGAATTTG AGCTGCCTTC AGAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39096929	mCV24521973	ABI	CRAMUS_MOUSE	f	SNP	G	G	G					A		A
ss47340753	NES11382135	PERLEGEN	MM_PANEL2	f	SNP	G		G	A	G	G	A		A	A	G	G		G	A	G	G		A
ss148630559	ENSMUSSNP4692048	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							A
ss324213489	CHEV_13_4246051	CHEVERUD	SCREENING_POP	f	SNP													G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29582633					SNP	G	G	G	A	G	G	A	A	A	A	G	G	G	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47340753	NES11382135	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:4296804 () rs orientation: forward

Symbol	Name	Function Class
Akr1c19	aldo-keto reductase family 1, member C19	within coordinates
Gm61344	predicted gene, 61344	within coordinates
Marcksl1-ps4	MARCKS-like 1, pseudogene 4	1930 bp upstream
Rr281305	regulatory region 281305	1004 bp distal
Rr283538	regulatory region 283538	404 bp distal
Rr283540	regulatory region 283540	1797 bp proximal