rs29584452 SNP Detail

Summary

• ID
  rs29584452
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:129062854 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATA GAAGGGCCCT GAGGGGCTGT
  R
  AGGCAGTGTT CATGCTTGCC CGGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45842835	mCV23582433	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss144458721	ENSMUSSNP3796895	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss321689252	CHEV_5_129491665	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29584452					SNP	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:129062854 () rs orientation: forward

Symbol	Name	Function Class
Rr116326	regulatory region 116326	1147 bp proximal
Rr116327	regulatory region 116327	1946 bp proximal
Stx2	syntaxin 2	within coordinates