rs29584492 SNP Detail

Summary

• ID
  rs29584492
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:18012191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGCTGCCC CCAACAGTAT
  AAGCACAGGA GCCTGTTCTG CCTCTTGTCT CTTGGAATGT GGCTCAGACT CTGCCTCTTG
  CCCGCTGGGA TGTGGTAAAG ACAGCCCCTT CCTTTCCTCA TGCCTTCATA TCTATGCCAG
  GTGGGAGAGC TTGCCCTGTG GTCATGAGAG TGGGAGAACT GGCCATATCA TTCACCAACT
  K
  CAAAACTTGG GACAGCTGGC CCTGCGCCTT GCCTAGCCAC AGGGTAGAGC TGGCCTTGTT
  TGTGGTGGTT GCAAATGAGC CAGCCCTGTG TGTGTGGAAA GTAAGAGAGC TGGAGGGTTG
  ACCAGCCCTG ATACCTCTCA AGCCCAAATC CAGGGCTTTG AATTGGCCCA CTGCAACACC
  TACCCTATCA ATGAACCGCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45841454	mCV23268442	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T	T
ss147966743	ENSMUSSNP851105	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29584492					SNP	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:18012191 () rs orientation: forward

Symbol	Name	Function Class
Cd36	CD36 molecule	within coordinates
Tssr50155	transcription start site region 50155	1118 bp upstream
Tssr50156	transcription start site region 50156	987 bp upstream
Tssr50157	transcription start site region 50157	920 bp upstream
Tssr50158	transcription start site region 50158	770 bp upstream
Tssr50159	transcription start site region 50159	693 bp downstream
Tssr50160	transcription start site region 50160	1187 bp downstream