rs29585074 SNP Detail

Summary

• ID
  rs29585074
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125572010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCACAAAG ATGGTTACCA ATGCCTCCGC CTCAAAGCTG
  CCATCTTCTT TCTGTCTTAA GACAGACAGA AAGACTCAGG ACAGATGCAC AGACCTCCAA
  Y
  GACTGTTCCC AGACCTTTGA ACCTGCGCGT GCCTAGCCAG GTTTGTAAAC TGCCTGAAAC
  ACAATGATGC TTTTTGCTTC TAACTTTCTT CTTTCTCAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45343724	mCV22613836	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss147486196	ENSMUSSNP5141481	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29585074					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125572010 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12201	CpG island 12201	1707 bp proximal
Rr397270	regulatory region 397270	1657 bp upstream
Rr564273	regulatory region 564273	1452 bp proximal