rs29585528 SNP Detail

Summary

• ID
  rs29585528
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:33123525 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCATATGA CTCTTGAACC CTGGAAGTCT GTTTCAGAGT
  GCATGGTACT GTGCTAAAAT ACAGATCAAA AGCCCAGGGA GCCTCAGGAC ACCTCAACCC
  R
  TGCTTCTTCC TACTCTTCAG ACAGACGGGC ACAGCATCCT GAGAGTGTAC TTAGATCCTC
  TGGGTCCTCC CCTGAAGTCT CCCAGGGCTC TGAGGGAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39098936	mCV24412966	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss148851136	ENSMUSSNP6529481	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29585528					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:33123525 () rs orientation: forward

Symbol	Name	Function Class
Gm11382	predicted pseudogene 11382	851 bp upstream
Rr476935	regulatory region 476935	921 bp distal
Rr476936	regulatory region 476936	within coordinates
Tssr122016	transcription start site region 122016	212 bp upstream
Tssr122017	transcription start site region 122017	1044 bp downstream
Tssr122018	transcription start site region 122018	1083 bp downstream