rs29586115 SNP Detail

Summary

• ID
  rs29586115
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:142094999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTG TATTTTTTTT ATTCAGATAT
  R
  CAGTCTTGCT ACATTGCCCT AGCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45843538	mCV25013571	ABI	CRAMUS_MOUSE	f	SNP		A	G	A
ss144586667	ENSMUSSNP4819803	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss321708045	CHEV_5_142585198	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29586115					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:142094999 () rs orientation: forward

Symbol	Name	Function Class
D330005C11Rik	RIKEN cDNA D330005C11 gene	187 bp upstream
Sdk1	sidekick cell adhesion molecule 1	within coordinates