rs29586886 SNP Detail

Summary

• ID
  rs29586886
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:117708529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCCCTGTCAC AGGGCAACGT TGTGATGCAC CTTCCGGATT CAGGGCCATT ACTGTGATTA
  AACGATCTCT ATGGCTTCGT GTTAGAGACA TTGGGAAGGT GTCAAAAAAA TACTGTTTTT
  TTCCCCATTA ATCAGTGAAA TAAAAATCTG AGGGCAAAAT GGAACCTGGT GATGTTAAAA
  GTTTCCCCGG GTAATTCTAG TTGTGCGGAC AGAGATGAGC AGCATCTCTA TAGACTGAAT
  TGTTATGTAT GCAAATTGTG TTTCCATGGA GCGGCCATTT CTCCAGAGTC TTTTTTTTTT
  Y
  CTTTTTTCCT AATTCTTCCT TAATCTGAAG AGATGGAATG ACTGGGAAGG TAAATGAGAG
  CGACTTCCAG CCCAATTAGC ACAGGTGCAA ATTAGCCTGC TCACAGTGTT TTCTGGCAGG
  TCACCCCTTT CTTTCCCACC CCCTTTGCTT TCTGGTGACG TGACAGTGAC AGCACTTTCT
  CCTTGCTGCA GTAAGACTTT GATGTGACAA GTCCCAGCTG AGGTGGACCA GCCTGTGGGG
  ACTCAGGACT CTCTGCGTAG GTTTCTGAAC TACCACAGAG GATGTCCCTG TGGGTGAGAG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46319398	mCV23293818	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs29586886					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:117708529 () rs orientation: forward

Symbol	Name	Function Class
Gm26614	predicted gene, 26614	within coordinates
Gm50606	predicted gene, 50606	within coordinates