rs29587867 SNP Detail

Summary

• ID
  rs29587867
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:77278528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAA TTAATGTATA CATAAACACG
  R
  CAATATAGAC TATGGATGTA TTTTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39096186	mCV22684967	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss144701566	ENSMUSSNP2769048	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss324447422	CHEV_13_77269670	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29587867					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:77278528 () rs orientation: forward

Symbol	Name	Function Class
Rr284990	regulatory region 284990	1816 bp distal
Rr284991	regulatory region 284991	474 bp proximal
Slf1	SMC5-SMC6 complex localization factor 1	within coordinates
Tssr123275	transcription start site region 123275	903 bp downstream